STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_11148LRR receptor-like serine/threonine-protein kinase GSO1. (1003 aa)    
Predicted Functional Partners:
TRIUR3_26641
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.769
TRIUR3_09303
Uncharacterized protein.
    
  0.739
T1LYB1_TRIUA
Uncharacterized protein.
    
  0.696
TRIUR3_17851
Uncharacterized protein.
    
 0.635
TRIUR3_12204
Elongation factor 1-gamma 2.
    
  0.603
T1M824_TRIUA
Uncharacterized protein.
    
  0.603
TRIUR3_16251
Uncharacterized protein.
    
 0.598
TRIUR3_16250
E3 ubiquitin-protein ligase KEG.
    
 0.598
TRIUR3_30108
Mitogen-activated protein kinase kinase kinase 2.
    
  0.589
TRIUR3_26874
U2 snRNP-associated SURP motif-containing protein.
    
  0.586
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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