STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_11849Pectinesterase. (359 aa)    
Predicted Functional Partners:
TRIUR3_29195
Polygalacturonase.
  
  
 0.933
T1MBC8_TRIUA
Uncharacterized protein; Belongs to the glycosyl hydrolase 28 family.
  
  
 0.928
TRIUR3_16546
Polygalacturonase ADPG1.
  
  
 0.918
TRIUR3_17717
Polygalacturonase.
  
  
 0.912
TRIUR3_17718
Polygalacturonase.
  
  
 0.912
T1NRF0_TRIUA
Uncharacterized protein.
  
  
 0.899
TRIUR3_29822
Polygalacturonase ADPG1.
  
  
 0.891
T1MK76_TRIUA
Uncharacterized protein.
  
  
  0.890
TRIUR3_28090
Pectate lyase.
  
 
 0.889
T1MA22_TRIUA
Pectate lyase.
  
 
 0.874
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.