STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_21210Uncharacterized protein. (186 aa)    
Predicted Functional Partners:
TRIUR3_03307
E3 ubiquitin-protein ligase UPL4.
    
 0.683
TRIUR3_30014
E3 ubiquitin-protein ligase UPL4.
    
 0.683
T1NMS0_TRIUA
HECT domain-containing protein.
    
 0.683
TRIUR3_15663
E3 ubiquitin-protein ligase UPL3.
     
 0.669
TRIUR3_24051
Uncharacterized protein.
     
 0.669
TRIUR3_32298
Ubiquitin-like modifier-activating enzyme atg7.
   
 
  0.661
TRIUR3_35263
NEDD8-activating enzyme E1 catalytic subunit.
   
 
  0.659
TRIUR3_01723
Uncharacterized protein.
    
  0.558
TRIUR3_08122
Ubiquitin-conjugating enzyme E2 27.
    
  0.558
TRIUR3_03477
Ubiquitin-60S ribosomal protein L40-2.
    
 0.409
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.