STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_29131Carboxypeptidase; Belongs to the peptidase S10 family. (422 aa)    
Predicted Functional Partners:
TRIUR3_01327
(R)-mandelonitrile lyase 2.
   
 
 0.645
TRIUR3_29578
Cysteine proteinase 1; Belongs to the peptidase C1 family.
   
 0.498
TRIUR3_20697
Cysteine proteinase 1; Belongs to the peptidase C1 family.
   
 0.498
T1M393_TRIUA
Uncharacterized protein; Belongs to the peptidase S10 family.
  
     0.489
TRIUR3_20749
Serine carboxypeptidase-like 6; Belongs to the peptidase S10 family.
  
     0.487
TRIUR3_17347
Cysteine proteinase 15A; Belongs to the peptidase C1 family.
   
 0.482
TRIUR3_27704
Periplasmic beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
  0.455
TRIUR3_02184
Lysosomal beta glucosidase; Belongs to the glycosyl hydrolase 3 family.
    
  0.455
T1NBG1_TRIUA
Uncharacterized protein; Belongs to the glycosyl hydrolase 3 family.
    
  0.455
TRIUR3_21351
Aspartic proteinase Asp1; Belongs to the peptidase A1 family.
   
 0.446
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.