STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIUR3_03839Calcium-dependent protein kinase 1. (629 aa)    
Predicted Functional Partners:
TRIUR3_14485
Uncharacterized protein.
   
 0.847
TRIUR3_20792
Respiratory burst oxidase-like protein F.
   
 0.847
TRIUR3_14484
Respiratory burst oxidase-like protein F.
   
 0.847
TRIUR3_34430
Serine/threonine-protein phosphatase.
  
 
 0.846
TRIUR3_26076
Respiratory burst oxidase-like protein E.
   
 0.826
TRIUR3_03395
Rac-like GTP-binding protein 2.
   
 0.820
TRIUR3_10760
Respiratory burst oxidase-like protein E.
   
 0.805
TRIUR3_04873
Respiratory burst oxidase-like protein B.
   
 0.803
TRIUR3_32348
Uncharacterized protein.
   
 0.783
TRIUR3_21323
Rac-like GTP-binding protein 3.
   
 0.748
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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