Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T1NEF3_TRIUA | TRIUR3_08966 | T1NEF3 | M7YK35 | RPOL4c domain-containing protein. | Uncharacterized protein. | 0.982 |
T1NEF3_TRIUA | TRIUR3_10049 | T1NEF3 | M8ARU9 | RPOL4c domain-containing protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.984 |
T1NEF3_TRIUA | TRIUR3_12357 | T1NEF3 | M8AK53 | RPOL4c domain-containing protein. | DNA-directed RNA polymerase III subunit RPC4. | 0.982 |
T1NEF3_TRIUA | TRIUR3_17393 | T1NEF3 | M7YXN4 | RPOL4c domain-containing protein. | DNA-directed RNA polymerase III subunit RPC4. | 0.982 |
T1NEF3_TRIUA | TRIUR3_18594 | T1NEF3 | M8A7E5 | RPOL4c domain-containing protein. | DNA-directed RNA polymerases I, II, and III subunit RPABC2. | 0.985 |
T1NEF3_TRIUA | TRIUR3_19554 | T1NEF3 | M8B287 | RPOL4c domain-containing protein. | DNA-directed RNA polymerase III subunit RPC5. | 0.978 |
T1NEF3_TRIUA | TRIUR3_26058 | T1NEF3 | M7ZBK3 | RPOL4c domain-containing protein. | DNA-directed RNA polymerases I and III subunit RPAC2. | 0.993 |
T1NEF3_TRIUA | TRIUR3_26115 | T1NEF3 | M8AIA0 | RPOL4c domain-containing protein. | RPOL9 domain-containing protein. | 0.982 |
T1NEF3_TRIUA | TRIUR3_27365 | T1NEF3 | M7ZU68 | RPOL4c domain-containing protein. | Uncharacterized protein. | 0.978 |
TRIUR3_08966 | T1NEF3_TRIUA | M7YK35 | T1NEF3 | Uncharacterized protein. | RPOL4c domain-containing protein. | 0.982 |
TRIUR3_08966 | TRIUR3_10049 | M7YK35 | M8ARU9 | Uncharacterized protein. | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.985 |
TRIUR3_08966 | TRIUR3_12357 | M7YK35 | M8AK53 | Uncharacterized protein. | DNA-directed RNA polymerase III subunit RPC4. | 0.816 |
TRIUR3_08966 | TRIUR3_18594 | M7YK35 | M8A7E5 | Uncharacterized protein. | DNA-directed RNA polymerases I, II, and III subunit RPABC2. | 0.977 |
TRIUR3_08966 | TRIUR3_19554 | M7YK35 | M8B287 | Uncharacterized protein. | DNA-directed RNA polymerase III subunit RPC5. | 0.982 |
TRIUR3_08966 | TRIUR3_21312 | M7YK35 | M7YY96 | Uncharacterized protein. | DNA-directed RNA polymerase III subunit RPC9. | 0.982 |
TRIUR3_08966 | TRIUR3_26058 | M7YK35 | M7ZBK3 | Uncharacterized protein. | DNA-directed RNA polymerases I and III subunit RPAC2. | 0.979 |
TRIUR3_08966 | TRIUR3_26115 | M7YK35 | M8AIA0 | Uncharacterized protein. | RPOL9 domain-containing protein. | 0.979 |
TRIUR3_08966 | TRIUR3_27365 | M7YK35 | M7ZU68 | Uncharacterized protein. | Uncharacterized protein. | 0.982 |
TRIUR3_10049 | T1NEF3_TRIUA | M8ARU9 | T1NEF3 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RPOL4c domain-containing protein. | 0.984 |
TRIUR3_10049 | TRIUR3_08966 | M8ARU9 | M7YK35 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.985 |
page 1 of 6