STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1MRE1_TRIUAUncharacterized protein. (410 aa)    
Predicted Functional Partners:
TRIUR3_31170
Uncharacterized protein.
     
 0.942
TRIUR3_06054
Cleavage and polyadenylation specificity factor subunit 3-II.
    
 0.823
TRIUR3_13680
Uncharacterized protein.
    
 0.781
TRIUR3_06044
Uncharacterized protein.
    
 0.778
TRIUR3_15265
Integrator complex subunit 4.
    
 0.756
TRIUR3_15264
Uncharacterized protein.
    
 0.756
TRIUR3_21893
DNA-directed RNA polymerase II subunit rpb4.
    
  0.742
TRIUR3_13249
Nitrate reductase [NADH].
    
 0.737
TRIUR3_08241
Nitrate reductase [NAD(P)H].
    
 0.737
TRIUR3_23501
Nitrate reductase [NADH].
    
 0.737
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.