STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1N799_TRIUAHomeobox domain-containing protein. (213 aa)    
Predicted Functional Partners:
T1NSD6_TRIUA
Uncharacterized protein.
  
 
 0.521
T1MEP6_TRIUA
TF-B3 domain-containing protein.
  
     0.488
TRIUR3_10660
AMSH-like ubiquitin thiolesterase 3.
    
 
 0.468
TRIUR3_17928
PMR5N domain-containing protein.
  
     0.466
T1MSP0_TRIUA
MPN domain-containing protein.
    
 
 0.466
TRIUR3_27793
USP8_dimer domain-containing protein.
    
 
 0.464
TRIUR3_35331
GRAM domain-containing protein.
  
     0.458
T1MPX3_TRIUA
TF-B3 domain-containing protein.
  
     0.456
TRIUR3_02318
GRAM domain-containing protein.
  
     0.453
TRIUR3_32863
LOB domain-containing protein.
  
     0.442
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.