STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1NIW9_TRIUAHistone H2A; Belongs to the histone H2A family. (129 aa)    
Predicted Functional Partners:
TRIUR3_05672
Metal regulatory transcription factor 1.
    
 0.919
TRIUR3_27468
Lysine-specific demethylase lid.
    
 0.919
TRIUR3_13819
Putative histone H2A variant 3; Belongs to the histone H2A family.
  
0.915
TRIUR3_18598
High mobility group B protein 15.
   
 0.915
TRIUR3_28394
Histone H2A; Belongs to the histone H2A family.
  
0.912
TRIUR3_17558
Histone-lysine N-methyltransferase SUVR5.
    
 0.900
TRIUR3_13010
Retinoblastoma-binding protein 5.
    
 0.899
TRIUR3_21896
DNA-directed RNA polymerase II subunit RPB11.
    
  0.899
TRIUR3_21893
DNA-directed RNA polymerase II subunit rpb4.
    
  0.899
TRIUR3_18594
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
    
  0.899
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.