STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1NNZ3_TRIUAUncharacterized protein. (61 aa)    
Predicted Functional Partners:
T1LL08_TRIUA
Uncharacterized protein.
   
 
 0.911
rpl22
50S ribosomal protein L22, chloroplastic; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.845
T1LYX2_TRIUA
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.845
T1N0C6_TRIUA
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.845
TRIUR3_28021
60S ribosomal protein L17-1; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.838
TRIUR3_21402
50S ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.834
T1LLH1_TRIUA
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.834
TRIUR3_10234
50S ribosomal protein L24, chloroplastic; Belongs to the universal ribosomal protein uL24 family.
   
 
 0.811
T1LCT9_TRIUA
Uncharacterized protein.
    
 
 0.806
TRIUR3_12289
50S ribosomal protein L17, chloroplastic; Belongs to the bacterial ribosomal protein bL17 family.
    
   0.802
Your Current Organism:
Triticum urartu
NCBI taxonomy Id: 4572
Other names: T. urartu, Triticum urartu Tumanian ex Gandilyan
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