Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_00002Hypothetical protein. (315 aa)    
Predicted Functional Partners:
CSBG_00001
Hypothetical protein.
       0.686
CSBG_00003
Hypothetical protein.
       0.606
CSBG_01097
Hypothetical protein.
  
    0.599
CSBG_02147
Hypothetical protein.
  
    0.534
CSBG_00557
Hypothetical protein.
  
    0.517
CSBG_03150
Hypothetical protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
  
    0.469
CSBG_02431
Hypothetical protein.
   
    0.449
CSBG_02314
Phosphoribosylformylglycinamidine synthase.
     
 0.410
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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