Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_00366Hypothetical protein. (517 aa)    
Predicted Functional Partners:
CSBG_00362
Hypothetical protein.
 
     0.935
CSBG_00364
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.859
CSBG_00363
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.822
CSBG_00365
Hypothetical protein.
 
     0.822
CSBG_00361
Hypothetical protein.
 
     0.671
CSBG_02878
LPXTG-domain-containing protein cell wall anchor domain.
  
  
  0.612
CSBG_02276
Hypothetical protein; Belongs to the 5'-nucleotidase family.
  
  
  0.611
tdk
Hypothetical protein.
    
  0.595
CSBG_02807
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
    
  0.594
CSBG_00092
Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
    
  0.573
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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