STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_00419LPXTG-domain-containing protein cell wall anchor domain. (1361 aa)    
Predicted Functional Partners:
CSBG_00515
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.808
CSBG_02053
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.791
CSBG_00350
Hypothetical protein.
   
 
 0.778
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
    
 0.762
CSBG_02058
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.707
CSBG_01015
Hypothetical protein.
   
 
 0.615
CSBG_02970
PAS domain S-box protein.
   
 
 0.615
CSBG_00370
Hypothetical protein.
    
  0.601
CSBG_00474
M6 family metalloprotease domain-containing protein.
    
  0.601
CSBG_02303
Hypothetical protein.
  
  
  0.535
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.