Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_00481Hypothetical protein. (484 aa)    
Predicted Functional Partners:
CSBG_00480
Hypothetical protein.
 
  
 0.914
CSBG_00440
Nucleotide sugar dehydrogenase.
  
  
 0.791
CSBG_00487
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.788
CSBG_00483
Hypothetical protein.
 
  
 0.786
CSBG_00486
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.785
CSBG_00475
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.776
CSBG_03161
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.771
CSBG_00485
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.767
CSBG_00139
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.765
CSBG_02031
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.765
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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