Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_00540Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (311 aa)    
Predicted Functional Partners:
CSBG_00541
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
0.995
CSBG_00542
Hypothetical protein.
 
  
 0.995
CSBG_00543
Hypothetical protein.
 
  
 0.995
CSBG_01335
Hypothetical protein.
 
  
 0.802
CSBG_00365
Hypothetical protein.
 
  
 0.785
CSBG_01332
Hypothetical protein.
 
  
 0.722
CSBG_00362
Hypothetical protein.
 
  
 0.659
CSBG_02513
Hypothetical protein.
 
  
 0.554
CSBG_00539
Hypothetical protein.
       0.440
CSBG_00364
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
   
0.423
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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