Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tlpSmall, acid-soluble spore protein tlp; Belongs to the Tlp family. (84 aa)    
Predicted Functional Partners:
CSBG_01634
Hypothetical protein.
  
  
 0.838
CSBG_01300
Stage III sporulation protein AD.
  
   
 0.526
CSBG_01561
Hypothetical protein.
  
     0.486
CSBG_03423
Hypothetical protein.
  
    0.463
CSBG_00798
Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.
       0.461
CSBG_01319
Stage II sporulation protein M.
      
 0.452
CSBG_00514
Ger(X)C family germination protein.
  
   
 0.437
CSBG_01562
Hypothetical protein.
  
     0.434
CSBG_01599
Hypothetical protein.
  
     0.418
CSBG_01297
Stage III sporulation protein AA.
      
 0.416
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.