Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSBG_00883Lactoylglutathione lyase. (127 aa)    
Predicted Functional Partners:
CSBG_00139
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.995
CSBG_02031
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.995
CSBG_01972
Hypothetical protein.
    
 0.973
CSBG_01139
Hypothetical protein.
 
 0.937
CSBG_02614
Hypothetical protein.
   
 0.912
CSBG_02260
Hypothetical protein.
  
 
 0.902
CSBG_00873
Hypothetical protein.
 
 
 0.894
CSBG_00359
Hypothetical protein.
  
 
 0.877
CSBG_02969
Hypothetical protein.
  
 
 0.877
CSBG_01352
Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.
   
 
 0.871
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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