Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_00915Hypothetical protein. (715 aa)    
Predicted Functional Partners:
CSBG_00916
Hypothetical protein.
 
     0.944
CSBG_00914
Hypothetical protein.
 
     0.908
CSBG_02087
Hypothetical protein.
     
  0.801
CSBG_00913
Hypothetical protein.
 
    0.774
CSBG_02040
Hypothetical protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.576
CSBG_02314
Phosphoribosylformylglycinamidine synthase.
    
  0.556
CSBG_01601
Sulfate permease.
   
 
  0.529
glsA
Glutaminase A; Belongs to the glutaminase family.
     
 0.522
CSBG_01827
L-asparaginase, type II.
     
  0.521
gshAB
Glutamate-cysteine ligase/gamma-glutamylcysteine synthetase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily.
     
  0.521
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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