Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01043Hypothetical protein. (157 aa)    
Predicted Functional Partners:
CSBG_01044
Hypothetical protein.
 
     0.914
CSBG_01048
HK97 family phage prohead protease.
 
  
 0.883
CSBG_01049
Hypothetical protein.
 
     0.858
CSBG_01046
Hypothetical protein.
 
   
 0.806
CSBG_01054
Hypothetical protein.
 
     0.792
CSBG_01047
HK97 family phage portal protein.
 
   
 0.780
CSBG_01057
Hypothetical protein.
 
   
 0.604
CSBG_03321
DNA adenine methylase.
  
    0.566
CSBG_01051
Hypothetical protein.
     
 0.532
CSBG_01045
Hypothetical protein.
       0.507
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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