Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01075Hypothetical protein. (259 aa)    
Predicted Functional Partners:
CSBG_02739
Hypothetical protein.
  
     0.710
CSBG_02156
Hypothetical protein.
  
     0.629
pfkA
6-phosphofructokinase 2; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.
       0.619
CSBG_02733
Hypothetical protein.
  
     0.593
CSBG_02729
Hypothetical protein.
  
     0.566
CSBG_00175
Hypothetical protein.
  
     0.545
CSBG_00337
Hypothetical protein.
     
  0.544
CSBG_02846
Hypothetical protein.
  
     0.489
CSBG_01070
Hypothetical protein.
 
     0.488
CSBG_00963
Hypothetical protein.
  
     0.458
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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