Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01166Hypothetical protein. (380 aa)    
Predicted Functional Partners:
CSBG_00772
Hypothetical protein.
  
     0.559
CSBG_01556
Hypothetical protein.
  
     0.554
CSBG_01167
Hypothetical protein.
       0.553
CSBG_01236
Putative sporulation protein YtxC.
  
     0.550
CSBG_02896
Hypothetical protein.
  
     0.542
CSBG_01218
Hypothetical protein.
  
     0.539
CSBG_01168
Hypothetical protein.
       0.534
CSBG_00612
Hypothetical protein.
  
     0.526
CSBG_02319
Hypothetical protein.
 
     0.522
CSBG_01914
Hypothetical protein.
  
     0.514
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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