STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01302Stage III sporulation protein AF. (192 aa)    
Predicted Functional Partners:
CSBG_01301
Stage III sporulation protein AE.
 
  
 0.995
CSBG_01300
Stage III sporulation protein AD.
 
  
 0.994
CSBG_01303
Stage III sporulation protein AG.
 
  
 0.988
CSBG_01304
Hypothetical protein.
 
  
 0.978
CSBG_01298
Stage III sporulation protein AB.
 
  
 0.973
CSBG_01299
Stage III sporulation protein AC.
  
  
 0.965
CSBG_01297
Stage III sporulation protein AA.
 
  
 0.930
CSBG_03107
Spore cortex biosynthesis protein YabQ.
  
    0.705
CSBG_03009
Hypothetical protein.
  
    0.675
CSBG_03044
Hypothetical protein.
  
     0.644
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.