Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01367Hypothetical protein. (579 aa)    
Predicted Functional Partners:
CSBG_01368
Hypothetical protein.
 
 
 
0.915
CSBG_00356
Hypothetical protein.
     
  0.781
CSBG_02284
Hypothetical protein.
     
  0.764
dnaK
Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.749
ecfA
Cobalt import ATP-binding protein CbiO 3; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 
0.715
CSBG_00756
Hypothetical protein.
   
 0.690
CSBG_02203
Hypothetical protein.
 
   
 
0.662
CSBG_03221
Hypothetical protein.
    
  0.658
CSBG_01639
Hypothetical protein.
   
 0.657
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
    
  0.634
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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