Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01490Hypothetical protein. (239 aa)    
Predicted Functional Partners:
CSBG_03138
Hypothetical protein.
  
  
 0.635
CSBG_00536
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.605
CSBG_03366
Rubredoxin.
  
  
 0.599
CSBG_01049
Hypothetical protein.
  
     0.558
CSBG_01211
Hypothetical protein.
     
  0.520
CSBG_01684
Hypothetical protein.
  
     0.495
CSBG_01739
Hypothetical protein.
  
   
 0.495
CSBG_00406
Cysteine desulfurase NifS; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
   
 
  0.488
CSBG_00685
Hypothetical protein.
   
 
 0.488
pyrK
Hypothetical protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
   
 
 0.488
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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