STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01547Hypothetical protein. (261 aa)    
Predicted Functional Partners:
CSBG_00514
Ger(X)C family germination protein.
  
     0.629
CSBG_03214
Hypothetical protein.
  
     0.628
CSBG_02293
Hypothetical protein.
  
     0.561
CSBG_02292
Hypothetical protein.
  
     0.542
CSBG_02499
Hypothetical protein.
  
     0.491
CSBG_02294
Hypothetical protein.
  
     0.439
CSBG_03293
Hypothetical protein.
  
     0.431
CSBG_01546
Hypothetical protein.
 
    
0.425
CSBG_00221
Hypothetical protein.
  
     0.417
CSBG_01236
Putative sporulation protein YtxC.
  
     0.416
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.