Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01580Hypothetical protein. (192 aa)    
Predicted Functional Partners:
CSBG_03193
Hypothetical protein.
   
 0.769
CSBG_01231
Hypothetical protein.
 
 
 0.722
CSBG_01867
Hypothetical protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
     
 0.708
CSBG_02168
Luciferase family oxidoreductase, group 1.
     
 0.703
CSBG_01578
Hypothetical protein.
 
   
 0.699
CSBG_01579
Hypothetical protein.
 
     0.687
CSBG_00891
Hypothetical protein.
   
 0.682
CSBG_02907
Hypothetical protein; Belongs to the FPP/GGPP synthase family.
  
 0.678
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 0.667
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 0.667
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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