Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01587Hypothetical protein. (364 aa)    
Predicted Functional Partners:
CSBG_01588
Hypothetical protein.
  
 
 0.929
CSBG_00356
Hypothetical protein.
    
  0.860
CSBG_01586
Hypothetical protein.
       0.840
CSBG_02284
Hypothetical protein.
   
 
  0.809
CSBG_01113
Hypothetical protein.
  
 
 0.745
CSBG_02985
Hypothetical protein.
  
 
 0.727
CSBG_02045
Hypothetical protein.
  
 
  0.714
CSBG_01836
Phosphate binding protein.
    
 0.713
CSBG_01559
Hypothetical protein.
  
 
 0.711
CSBG_01612
Hypothetical protein.
  
 
 0.711
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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