Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01596Hypothetical protein. (122 aa)    
Predicted Functional Partners:
CSBG_00139
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.999
CSBG_02031
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.999
CSBG_00932
2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
 0.994
CSBG_01595
Arsenite-activated ATPase ArsA.
   
 0.977
rnfB
Electron transport complex, rnfabcdge type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.977
CSBG_01572
Hypothetical protein.
  
 0.956
CSBG_02666
Hypothetical protein.
  
 
 0.946
CSBG_00536
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
 
  
 0.930
CSBG_01867
Hypothetical protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.903
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
  
 
 0.896
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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