Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01896Heavy metal translocating P-type ATPase. (811 aa)    
Predicted Functional Partners:
CSBG_01650
Hypothetical protein.
 
 
 0.836
CSBG_02590
Hypothetical protein.
  
 
 0.821
CSBG_00185
Hypothetical protein.
 
  
 0.759
CSBG_01651
Hypothetical protein.
 
  
 0.757
CSBG_00186
Heavy metal translocating P-type ATPase.
 
 
0.741
CSBG_00010
Hypothetical protein.
  
 
 0.699
CSBG_02263
Hypothetical protein.
  
 
 0.663
CSBG_01899
Hypothetical protein.
  
    0.486
CSBG_01157
Hypothetical protein.
 
  
 0.464
CSBG_01895
Hypothetical protein.
     
 0.435
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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