Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_01965His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region. (478 aa)    
Predicted Functional Partners:
CSBG_01964
Hypothetical protein.
 0.999
CSBG_00253
Hypothetical protein.
 0.961
CSBG_00675
Hypothetical protein.
 0.960
CSBG_03181
Hypothetical protein.
 0.960
CSBG_00673
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 
0.952
CSBG_00549
Chorismate mutase.
    
 0.915
CSBG_00674
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
0.905
CSBG_00356
Hypothetical protein.
     
 0.897
CSBG_02284
Hypothetical protein.
   
 
 0.847
CSBG_00350
Hypothetical protein.
   
 0.812
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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