Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02029Hypothetical protein. (274 aa)    
Predicted Functional Partners:
CSBG_02031
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.866
CSBG_03199
PTS system, Fru family, IIC component.
     
  0.827
CSBG_00139
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.820
CSBG_02028
Hypothetical protein.
  
    0.818
rnc
Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
      0.759
CSBG_00749
PTS system, Fru family, IIC component.
     
  0.683
CSBG_02027
HAD hydrolase, family IB.
       0.587
CSBG_02811
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.553
CSBG_03173
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.553
CSBG_00731
PTS system, glucose-like IIB component.
     
  0.543
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.