STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02065Hypothetical protein. (87 aa)    
Predicted Functional Partners:
CSBG_02066
Hypothetical protein.
 
  
 0.981
CSBG_01635
Hypothetical protein.
 
  
 0.819
CSBG_02064
Hypothetical protein.
       0.789
CSBG_01829
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.643
CSBG_02853
Sporulation transcriptional regulator SpoIIID.
  
    0.633
CSBG_01962
Hypothetical protein.
  
  
 0.627
CSBG_00688
Hypothetical protein.
  
  
 0.618
CSBG_01816
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
   
    0.556
CSBG_02898
Sporulation peptidase YabG.
  
  
 0.555
CSBG_02296
Stage V sporulation protein AD.
  
     0.552
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.