STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02100Hypothetical protein. (349 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
    
 0.785
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.754
CSBG_00139
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.555
CSBG_02031
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.555
CSBG_03194
Hypothetical protein.
  
     0.467
CSBG_01366
Hypothetical protein.
  
 
 0.464
CSBG_01164
Exodeoxyribonuclease III (xth).
   
    0.461
CSBG_00494
Hypothetical protein.
  
 
 0.439
CSBG_01589
Hypothetical protein.
   
 0.410
CSBG_01901
Hypothetical protein.
   
 0.410
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.