Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02182Hypothetical protein. (227 aa)    
Predicted Functional Partners:
CSBG_02183
Hypothetical protein.
 
    0.978
CSBG_02184
Hypothetical protein.
 
     0.942
CSBG_00835
Hypothetical protein.
 
    0.889
CSBG_01870
Hypothetical protein.
 
    0.651
CSBG_00836
Hypothetical protein.
  
     0.607
CSBG_02180
Hypothetical protein.
 
     0.551
CSBG_02181
Hypothetical protein.
 
     0.546
CSBG_03481
Hypothetical protein.
       0.465
CSBG_00829
Hypothetical protein.
 
     0.464
CSBG_02752
Hypothetical protein.
    
   0.415
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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