STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_022322-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase. (215 aa)    
Predicted Functional Partners:
CSBG_02231
Hypothetical protein.
 
 
 0.975
CSBG_00139
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.941
CSBG_02031
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.941
CSBG_00422
Hypothetical protein.
 
 
 0.940
CSBG_00319
Hypothetical protein.
 
 
 0.934
rnfB
Electron transport complex, rnfabcdge type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
     
  0.891
CSBG_00731
PTS system, glucose-like IIB component.
    
 0.800
CSBG_00803
PTS system, beta-glucoside-specific IIABC component.
    
 0.800
CSBG_01464
PTS system, beta-glucoside-specific IIABC component.
    
 0.800
CSBG_02275
PTS system, sucrose-specific IIBC component.
    
 0.800
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.