Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02243Hypothetical protein. (236 aa)    
Predicted Functional Partners:
CSBG_01168
Hypothetical protein.
     0.923
CSBG_01495
Glutamine synthetase.
  
 
 0.807
CSBG_02999
Hypothetical protein; Belongs to the glutamine synthetase family.
  
 
 0.807
CSBG_01867
Hypothetical protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.681
CSBG_02581
Hypothetical protein.
  
  
  0.595
CSBG_02391
Arginase; Belongs to the arginase family.
    
 0.589
CSBG_00017
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.559
CSBG_01156
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.559
CSBG_02314
Phosphoribosylformylglycinamidine synthase.
    
  0.553
glsA
Glutaminase A; Belongs to the glutaminase family.
     
  0.548
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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