Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02400Hypothetical protein. (89 aa)    
Predicted Functional Partners:
CSBG_01800
Phosphate acetyltransferase.
    
 0.892
CSBG_01867
Hypothetical protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
 0.884
CSBG_01156
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
    
 0.874
CSBG_00017
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
    
 0.869
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.787
ackA-2
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.787
CSBG_00119
Acetolactate synthase, large subunit, biosynthetic type.
     
 0.779
CSBG_00104
Phosphate butyryltransferase.
    
 0.754
ndk
Hypothetical protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
 
     0.716
CSBG_00470
Hypothetical protein.
    
  0.597
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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