Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CSBG_02403Aspartate 4-decarboxylase. (550 aa)    
Predicted Functional Partners:
CSBG_00139
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.962
CSBG_02031
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.962
rnfB
Electron transport complex, rnfabcdge type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.924
CSBG_00549
Chorismate mutase.
  
 
 0.861
CSBG_01671
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.848
gshAB
Glutamate-cysteine ligase/gamma-glutamylcysteine synthetase; Synthesizes glutathione from L-glutamate and L-cysteine via gamma-L-glutamyl-L-cysteine; In the N-terminal section; belongs to the glutamate--cysteine ligase type 1 family. Type 2 subfamily.
 
 
 0.827
CSBG_03193
Hypothetical protein.
  
 
 0.821
CSBG_00536
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
 
 0.810
CSBG_00950
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.798
CSBG_01751
Aspartate kinase, monofunctional class; Belongs to the aspartokinase family.
  
 
 0.798
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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