Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02436CotS family spore coat protein. (353 aa)    
Predicted Functional Partners:
CSBG_03107
Spore cortex biosynthesis protein YabQ.
  
     0.723
CSBG_03044
Hypothetical protein.
  
     0.721
CSBG_02730
Hypothetical protein.
  
    0.709
CSBG_02392
Hypothetical protein.
  
     0.682
CSBG_03005
Hypothetical protein.
  
     0.682
CSBG_01258
Hypothetical protein.
  
  
 0.679
CSBG_01940
Hypothetical protein.
  
     0.660
CSBG_02435
Putative dGTPase; Belongs to the dGTPase family. Type 2 subfamily.
       0.660
CSBG_01230
Hypothetical protein.
  
     0.652
CSBG_01236
Putative sporulation protein YtxC.
  
     0.652
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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