STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02453Hypothetical protein. (516 aa)    
Predicted Functional Partners:
rnfB
Electron transport complex, rnfabcdge type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.988
CSBG_00536
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
 0.987
CSBG_02105
uroporphyrinogen-III C-methyltransferase.
 
  
 0.961
CSBG_02284
Hypothetical protein.
  
  
 0.941
CSBG_01572
Hypothetical protein.
  
 
 0.911
CSBG_00937
Hypothetical protein.
  
 0.901
CSBG_02040
Hypothetical protein; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.892
CSBG_00634
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.876
CSBG_01209
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.876
CSBG_02353
Hypothetical protein.
     
 0.867
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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