STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gprGPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. (324 aa)    
Predicted Functional Partners:
CSBG_02463
Stage II sporulation protein P.
 
  
 0.943
CSBG_02470
Stage V sporulation protein AD.
  
  
 0.913
CSBG_02296
Stage V sporulation protein AD.
  
  
 0.912
CSBG_02851
Putative sporulation protein YyaC.
  
  
 0.864
CSBG_02471
Stage V sporulation protein AC.
  
  
 0.862
CSBG_02295
Stage V sporulation protein AC.
  
  
 0.860
CSBG_01316
Stage IV sporulation protein B.
  
    0.851
CSBG_01829
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.809
CSBG_03285
Putative sporulation protein YyaC.
  
  
 0.802
CSBG_01325
Sporulation protein YtfJ.
  
    0.798
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.