STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02467Hypothetical protein. (562 aa)    
Predicted Functional Partners:
CSBG_02466
DNA polymerase III, delta subunit.
 
   
 0.861
CSBG_02845
comF family protein.
 
  
 0.830
CSBG_01779
DNA protecting protein DprA.
 
  
 0.790
CSBG_02468
HAD ATPase, P-type, family IC.
  
    0.786
CSBG_01780
Mg chelatase-like protein.
 
  
 0.718
cinA
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
     
 0.656
CSBG_02783
comEA protein.
  
  
 0.561
spoIIAB
Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.
  
    0.548
CSBG_01781
TIGR00252 family protein; Belongs to the UPF0102 family.
  
    0.524
CSBG_02846
Hypothetical protein.
  
  
 0.524
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.