STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02476Hypothetical protein. (390 aa)    
Predicted Functional Partners:
CSBG_03366
Rubredoxin.
 
 
 0.709
CSBG_01660
Desulfoferrodoxin.
 
  
 0.700
CSBG_03200
Rubrerythrin.
 
  
 0.615
CSBG_00627
Hypothetical protein.
 
  
 0.608
CSBG_02416
Hemerythrin-like metal-binding domain-containing protein.
  
  
 0.601
CSBG_01206
Hypothetical protein.
 
  
 0.573
CSBG_01195
Hypothetical protein.
 
  
 0.544
CSBG_02477
Hypothetical protein.
       0.526
CSBG_03138
Hypothetical protein.
  
  
 0.492
CSBG_02480
Hypothetical protein.
 
 
 0.479
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.