STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02491Hypothetical protein. (295 aa)    
Predicted Functional Partners:
CSBG_00549
Chorismate mutase.
  
 
 0.876
CSBG_02395
Hypothetical protein.
  
 0.866
CSBG_00139
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.841
CSBG_02031
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.841
CSBG_03394
Hypothetical protein.
 
0.820
sigA
RNA polymerase sigma factor rpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.761
CSBG_00307
Hypothetical protein.
 
  
  0.733
CSBG_00152
Hypothetical protein.
 
 
 0.690
CSBG_00302
Hypothetical protein.
 
 
0.681
CSBG_01867
Hypothetical protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.666
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.