Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02537Hypothetical protein. (398 aa)    
Predicted Functional Partners:
CSBG_01705
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
  
 
 0.912
CSBG_01600
Hypothetical protein; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.860
CSBG_02973
Hypothetical protein.
     
 0.820
CSBG_00359
Hypothetical protein.
    
 0.791
CSBG_02969
Hypothetical protein.
    
 0.791
CSBG_00490
Hypothetical protein.
     
 0.749
CSBG_03536
LPXTG-domain-containing protein cell wall anchor domain.
 
 0.749
CSBG_00489
Hypothetical protein.
     
  0.743
CSBG_02270
Hypothetical protein.
    
 0.735
CSBG_01369
Hypothetical protein.
 
 
 0.722
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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