STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02607Alpha,alpha-phosphotrehalase. (549 aa)    
Predicted Functional Partners:
CSBG_01705
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
 
 0.944
CSBG_02610
PTS system, glucose-like IIB component.
 
 
 0.903
CSBG_00731
PTS system, glucose-like IIB component.
 
 
 0.898
CSBG_02275
PTS system, sucrose-specific IIBC component.
 
 
 0.897
CSBG_00803
PTS system, beta-glucoside-specific IIABC component.
  
 
 0.882
CSBG_01464
PTS system, beta-glucoside-specific IIABC component.
  
 
 0.882
CSBG_02830
PTS system, glucose-specific IIBC component.
  
 
 0.882
CSBG_03229
Pullulanase, type I; Belongs to the glycosyl hydrolase 13 family.
 
 0.869
CSBG_00672
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.846
CSBG_02744
4-alpha-glucanotransferase.
  
 
 0.834
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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