Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02635Hypothetical protein. (499 aa)    
Predicted Functional Partners:
CSBG_02634
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
CSBG_00598
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.996
CSBG_02636
Hypothetical protein.
 
 0.979
CSBG_00599
Hypothetical protein.
 
 0.974
CSBG_02629
Hypothetical protein.
 
 0.969
CSBG_01100
Hypothetical protein.
 
 0.957
CSBG_01101
Hypothetical protein.
 
 0.956
CSBG_02630
Hypothetical protein.
 
 0.922
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.916
CSBG_00356
Hypothetical protein.
     
  0.865
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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