Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02886Hypothetical protein. (359 aa)    
Predicted Functional Partners:
CSBG_02881
Hypothetical protein.
 
 
 0.957
CSBG_02143
Hypothetical protein.
 
 
 0.949
CSBG_02880
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.928
CSBG_03484
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.919
CSBG_03483
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.918
CSBG_03482
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.914
CSBG_03456
Hypothetical protein.
 
 
 0.913
CSBG_02885
Pyrimidine-nucleoside phosphorylase.
     
 0.769
deoC-2
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
  
  
 0.706
CSBG_02882
Hypothetical protein.
 
  
 
0.689
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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