STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSBG_02899CotS family spore coat protein. (333 aa)    
Predicted Functional Partners:
CSBG_02900
Hypothetical protein.
 
  
 0.840
CSBG_02898
Sporulation peptidase YabG.
 
  
 0.784
CSBG_02896
Hypothetical protein.
 
   
 0.782
CSBG_01230
Hypothetical protein.
  
     0.722
CSBG_03107
Spore cortex biosynthesis protein YabQ.
  
     0.688
CSBG_03044
Hypothetical protein.
  
     0.681
CSBG_01940
Hypothetical protein.
  
     0.670
CSBG_01236
Putative sporulation protein YtxC.
  
     0.657
CSBG_03005
Hypothetical protein.
  
     0.657
CSBG_00622
UPF0229 protein; Belongs to the UPF0229 family.
  
  
 0.617
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.