Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CSBG_03075Hypothetical protein. (111 aa)    
Predicted Functional Partners:
CSBG_00139
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.918
CSBG_02031
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.918
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.769
CSBG_00932
2-oxoacid:acceptor oxidoreductase, alpha subunit.
  
 
  0.566
CSBG_02811
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
  0.527
CSBG_03173
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
  0.527
CSBG_03076
Hypothetical protein.
       0.503
cinA
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
 
  
 0.469
CSBG_03418
Glucose-1-phosphate adenylyltransferase, GlgD subunit.
     
  0.466
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
     
  0.466
Your Current Organism:
Clostridium sp. 7243FAA
NCBI taxonomy Id: 457396
Other names: C. sp. 7_2_43FAA, Clostridium sp. 7_2_43FAA
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